Command-line tool
oarfish
brew/oarfish
Checked 25 Oct 2026, 21:09 UTC · Listing refreshed from Homebrew, winget, npm, Scoop and cargo; npm packages checked against OSV.dev
Long read RNA-seq quantification
At a glance
- Type
- Command-line tool
- Install on
- macOS, Linux
- Last checked
- 25 Oct 2026, 21:09 UTC
Install it
macOS
brew install oarfish
Linux
brew install oarfish
Related command-line tools
- salmon
Transcript-level quantification from RNA-seq reads - stringtie
Transcript assembly and quantification for RNA-Seq - polypolish
Short-read polishing tool for long-read assemblies - badread
Long read simulator that can imitate many types of read problems - filtlong
Quality filtering of long noisy DNA sequencing reads - autocycler
Tool for generating consensus long-read assemblies for bacterial genomes - chopper
Filter and trim long-read sequencing data by quality and length - fastplong
Ultra-fast preprocessing and quality control for long-read sequencing data
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