MCP server

Pride

io.github.pipeworx-io/pride

Checked 26 Oct 2026, 08:29 UTC · Connected to it and listed its tools

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

Website Source

At a glance

Type

MCP server

Publisher

pipeworx.io (verified by the MCP Registry)

Status

Working at last check

Tools

44

Token cost

About 26,652 tokens per request

Sets up in

Claude Code, Claude Desktop, Codex, Gemini CLI, Cursor, VS Code, Antigravity, ChatGPT, OpenAI API, Grok

Last checked

26 Oct 2026, 08:29 UTC

Connect it to your agent

Add to CursorAdd to VS CodeVS Code Insiders

Opens the app, which shows the server and asks you to confirm. For other apps, copy the setup below.

Claude Code

claude mcp add --transport http pride https://gateway.pipeworx.io/pride/mcp

Claude Desktop

Settings → Connectors → Add custom connector, and paste the URL.

Codex (config.toml)

[mcp_servers.pride]
url = "https://gateway.pipeworx.io/pride/mcp"

Gemini CLI

{"mcpServers":{"pride":{"httpUrl":"https://gateway.pipeworx.io/pride/mcp"}}}

Cursor

{"mcpServers":{"pride":{"url":"https://gateway.pipeworx.io/pride/mcp"}}}

VS Code

{"servers":{"pride":{"type":"http","url":"https://gateway.pipeworx.io/pride/mcp"}}}

Antigravity

agy mcp add pride https://gateway.pipeworx.io/pride/mcp

ChatGPT

Settings → Apps & Connectors → Advanced settings: turn on Developer mode, then Create a connector and paste the URL. Which plans can do this varies.

OpenAI API (Responses tools)

{"type":"mcp","server_label":"pride","server_url":"https://gateway.pipeworx.io/pride/mcp","require_approval":"always"}

Grok (xAI API tools)

{"type":"mcp","server_label":"pride","server_url":"https://gateway.pipeworx.io/pride/mcp"}

Tools

• get_project ~136 tokens
  Get full metadata for one PRIDE Archive proteomics project by accession (e.g. "PXD000001"): title, description, sample-processing and data-processing protocols, organisms, organism parts, diseases, instruments, keywords, and DOI.
• search_projects ~213 tokens
  Search EBI PRIDE Archive — the largest public proteomics/mass-spectrometry dataset repository — for projects by keyword (disease, organism, technique, protein, instrument). Returns matching project accessions with title, organisms, diseases, and instruments. Keyless.

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