MCP server

Mydisease

io.github.pipeworx-io/mydisease

Checked 26 Oct 2026, 08:29 UTC · Connected to it and listed its tools

MyDisease.info MCP.

Website Source

At a glance

Type

MCP server

Publisher

pipeworx.io (verified by the MCP Registry)

Status

Working at last check

Tools

45

Token cost

About 26,906 tokens per request

Sets up in

Claude Code, Claude Desktop, Codex, Gemini CLI, Cursor, VS Code, Antigravity, ChatGPT, OpenAI API, Grok

Last checked

26 Oct 2026, 08:29 UTC

Connect it to your agent

Add to CursorAdd to VS CodeVS Code Insiders

Opens the app, which shows the server and asks you to confirm. For other apps, copy the setup below.

Claude Code

claude mcp add --transport http mydisease https://gateway.pipeworx.io/mydisease/mcp

Claude Desktop

Settings → Connectors → Add custom connector, and paste the URL.

Codex (config.toml)

[mcp_servers.mydisease]
url = "https://gateway.pipeworx.io/mydisease/mcp"

Gemini CLI

{"mcpServers":{"mydisease":{"httpUrl":"https://gateway.pipeworx.io/mydisease/mcp"}}}

Cursor

{"mcpServers":{"mydisease":{"url":"https://gateway.pipeworx.io/mydisease/mcp"}}}

VS Code

{"servers":{"mydisease":{"type":"http","url":"https://gateway.pipeworx.io/mydisease/mcp"}}}

Antigravity

agy mcp add mydisease https://gateway.pipeworx.io/mydisease/mcp

ChatGPT

Settings → Apps & Connectors → Advanced settings: turn on Developer mode, then Create a connector and paste the URL. Which plans can do this varies.

OpenAI API (Responses tools)

{"type":"mcp","server_label":"mydisease","server_url":"https://gateway.pipeworx.io/mydisease/mcp","require_approval":"always"}

Grok (xAI API tools)

{"type":"mcp","server_label":"mydisease","server_url":"https://gateway.pipeworx.io/mydisease/mcp"}

Tools

• disease ~246 tokens
  Fetch the full aggregated annotation object for a single disease id. Accepts MONDO ("MONDO:0015967"), DOID ("DOID:9351"), OMIM ("OMIM:125853") and other supported ontology ids. Returns cross-referenced data including MONDO ontology (labels, synonyms, xrefs, parents/children), gene-disease associatio
• metadata ~79 tokens
  Returns MyDisease.info build metadata: total disease document count, available annotation sources (MONDO, DOID, OMIM, DisGeNET, HPO, CTD), and their current release versions.
• query ~278 tokens
  Search MyDisease.info for diseases by free-text name or fielded query. Returns matching hits, each keyed by a MONDO disease id (e.g. "MONDO:0015967") with the best-matching ontology and annotation keys. Use this to resolve a disease name to canonical ontology ids before calling the "disease" tool. F

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