Command-line tool
seqwish
brew/seqwish
Checked 25 Oct 2026, 21:09 UTC · Listing refreshed from Homebrew, winget, npm, Scoop and cargo; npm packages checked against OSV.dev
Alignment to variation graph inducer
At a glance
- Type
- Command-line tool
- Install on
- macOS, Linux
- Last checked
- 25 Oct 2026, 21:09 UTC
Install it
macOS
brew install seqwish
Linux
brew install seqwish
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- annotsv
Annotation and ranking of structural variations - align
Text column alignment filter - rasusa
Randomly subsample sequencing reads or alignments - minibwa
Successor of BWA-MEM for short-read alignment - spoa
SIMD partial order alignment tool/library - kalign
Fast multiple sequence alignment program for biological sequences - biodiff
Hex diff viewer using alignment algorithms from biology - tracy-genomics
Basecalling, alignment, assembly and deconvolution of Sanger chromatograms
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