Command-line tool

mosdepth

brew/mosdepth

Checked 25 Oct 2026, 21:09 UTC · Listing refreshed from Homebrew, winget, npm, Scoop and cargo; npm packages checked against OSV.dev

Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Website Source

At a glance

Type

Command-line tool

Install on

macOS, Linux

Last checked

25 Oct 2026, 21:09 UTC

Install it

macOS

brew install mosdepth

Linux

brew install mosdepth

Related command-line tools

• perbase
  Fast and correct perbase BAM/CRAM analysis
• rustqc
  Fast genomics quality control tools for sequencing data
• fastplong
  Ultra-fast preprocessing and quality control for long-read sequencing data
• samtools
  Tools for manipulating next-generation sequencing data
• cram
  Functional testing framework for command-line applications rust backup archive compression extract zip cli…
• somalier
  Relatedness, QC and ancestry checks from BAM/CRAM/VCF
• goleft
  Tools for coverage and QC of BAM/CRAM files, including indexcov
• dav1d
  AV1 decoder targeted to be small and fast

Listing text is written by the maker; AptLynx lists tools and does not vouch for them. Find another tool · Browse by topic · For agents