Command-line tool
abyss
brew/abyss
Checked 25 Oct 2026, 21:09 UTC · Listing refreshed from Homebrew, winget, npm, Scoop and cargo; npm packages checked against OSV.dev
Genome sequence assembler for short reads
At a glance
- Type
- Command-line tool
- Install on
- macOS, Linux
- Last checked
- 25 Oct 2026, 21:09 UTC
Install it
macOS
brew install abyss
Linux
brew install abyss
Related command-line tools
- bwa
Burrow-Wheeler Aligner for pairwise alignment of DNA - spades
De novo genome sequence assembly - flye
De novo assembler for single molecule sequencing reads using repeat graphs - asmfmt
Go Assembler Formatter - autocycler
Tool for generating consensus long-read assemblies for bacterial genomes - keystone
Assembler framework: Core + bindings - jasmin
Assembler for the Java Virtual Machine - etk-asm
EVM Toolkit assembler
Listing text is written by the maker; AptLynx lists tools and does not vouch for them. Find another tool · Browse by topic · For agents